Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_15170 | Not Available | Negative | 1510041 - 1510463 | 16298.8 |
| zinc-binding protein | AO275_15175 | Not Available | Positive | 1510728 - 1511315 | 21227.0 |
| methionine abc transporter atp-binding protein | AO275_15180 | Not Available | Positive | 1511385 - 1512095 | 25805.0 |
| peptide abc transporter permease | AO275_15185 | Not Available | Positive | 1512097 - 1513362 | 46252.6 |
| hypothetical protein | AO275_15190 | Not Available | Positive | 1513359 - 1513895 | 19653.0 |
| hypothetical protein | AO275_15195 | Not Available | Positive | 1513999 - 1514685 | 24410.1 |
| nad-dependent dehydratase | AO275_15200 | Not Available | Negative | 1515020 - 1515949 | 33242.6 |
| dtdp-4-dehydrorhamnose reductase | AO275_15205 | Not Available | Negative | 1515942 - 1516826 | 32679.0 |
| mechanosensitive ion channel protein | AO275_15210 | Not Available | Negative | 1516943 - 1519219 | 81771.4 |
| lysr family transcriptional regulator | AO275_15215 | Not Available | Negative | 1519344 - 1519697 | 12694.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
