Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_15765 | Not Available | Positive | 46228 - 46407 | 6166.45 |
| hypothetical protein | AO275_15770 | Not Available | Positive | 46577 - 47089 | 18820.3 |
| hypothetical protein | AO275_15775 | Not Available | Positive | 47237 - 47965 | 26448.9 |
| hypothetical protein | AO275_15780 | Not Available | Positive | 48050 - 48922 | 33766.3 |
| transcriptional regulator | AO275_15785 | Not Available | Negative | 48981 - 49355 | 13384.4 |
| rna helicase | AO275_15790 | Not Available | Negative | 49645 - 50982 | 48866.6 |
| thermostable hemolysin | AO275_15795 | Not Available | Positive | 51245 - 51922 | 24455.2 |
| long-chain acyl-coa synthetase | AO275_15800 | Not Available | Positive | 51912 - 53405 | 54132.8 |
| long-chain fatty acid--coa ligase | AO275_15805 | Not Available | Positive | 53402 - 54091 | 25763.8 |
| short-chain dehydrogenase | AO275_15810 | Not Available | Positive | 54078 - 54887 | 28987.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
