Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyladenine dna glycosylase | AO275_14965 | Not Available | Positive | 1472658 - 1473329 | 25034.9 |
| phosphoesterase | AO275_14970 | Not Available | Positive | 1473333 - 1474649 | 47060.0 |
| atp-dependent protease | AO275_14975 | Not Available | Negative | 1474791 - 1475381 | 21521.8 |
| hypothetical protein | AO275_14980 | Not Available | Negative | 1475393 - 1476109 | 24806.4 |
| murein hydrolase transporter lrga | AO275_14985 | Not Available | Negative | 1476106 - 1476468 | 13256.0 |
| dehydratase | AO275_14990 | Not Available | Positive | 1476673 - 1477128 | 16806.7 |
| peptidase c13 | AO275_14995 | Not Available | Positive | 1477267 - 1478994 | 62162.4 |
| nucleoside-diphosphate sugar epimerase | AO275_15000 | Not Available | Positive | 1479022 - 1479663 | 23304.3 |
| hypothetical protein | AO275_15005 | Not Available | Negative | 1479764 - 1480048 | 9419.69 |
| aromatic acid decarboxylase | AO275_15010 | Not Available | Negative | 1480041 - 1480670 | 22686.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
