Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| precorrin isomerase | AO275_14865 | Not Available | Negative | 1453909 - 1454535 | 22155.0 |
| oxidoreductase | AO275_14870 | Not Available | Negative | 1454528 - 1455808 | 44861.4 |
| precorrin-6y c5,15-methyltransferase | AO275_14875 | Not Available | Positive | 1456025 - 1457227 | 42874.7 |
| cobalt-precorrin-6a synthase | AO275_14880 | Not Available | Positive | 1457227 - 1458339 | 38576.7 |
| cobalt-precorrin-6x reductase | AO275_14885 | Not Available | Positive | 1458336 - 1459052 | 26478.7 |
| lipoyl synthase | AO275_14890 | Not Available | Positive | 1459208 - 1459363 | 5747.91 |
| murein transglycosylase | AO275_14895 | Not Available | Positive | 1459447 - 1460775 | 47726.3 |
| lipoyl synthase | AO275_14900 | Not Available | Negative | 1460977 - 1461984 | 37656.8 |
| lipoate--protein ligase | AO275_14905 | Not Available | Negative | 1461977 - 1462633 | 23829.5 |
| hypothetical protein | AO275_14910 | Not Available | Negative | 1462633 - 1462908 | 9981.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
