Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazolecarboxamide formyltransferase | AO275_14815 | Not Available | Positive | 1441575 - 1443179 | 57562.8 |
| phosphoribosylamine--glycine ligase | AO275_14820 | Not Available | Positive | 1443381 - 1444676 | 45564.4 |
| histidine kinase | AO275_14825 | Not Available | Positive | 1444765 - 1447554 | 102809.0 |
| hypothetical protein | AO275_14830 | Not Available | Positive | 1447627 - 1448223 | 21416.9 |
| hypothetical protein | AO275_14835 | Not Available | Negative | 1448230 - 1448865 | 23442.2 |
| hypothetical protein | AO275_14840 | Not Available | Negative | 1448898 - 1449530 | 23681.3 |
| hypothetical protein | AO275_14845 | Not Available | Negative | 1449517 - 1450248 | 27131.3 |
| hypothetical protein | AO275_14850 | Not Available | Negative | 1450300 - 1451130 | 29753.0 |
| precorrin-3b c17-methyltransferase | AO275_14855 | Not Available | Negative | 1451478 - 1453178 | 60286.9 |
| precorrin-2 c20-methyltransferase | AO275_14860 | Not Available | Negative | 1453178 - 1453909 | 26633.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
