Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_14765 | Not Available | Positive | 1432070 - 1432807 | 26608.0 |
| hypothetical protein | AO275_14770 | Not Available | Positive | 1432834 - 1433097 | 9180.58 |
| thiol:disulfide interchange protein | AO275_14775 | Not Available | Positive | 1433210 - 1434991 | 63357.0 |
| 3-dehydroquinate dehydratase | AO275_14780 | Not Available | Positive | 1435120 - 1435572 | 16477.8 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | AO275_14785 | Not Available | Positive | 1435652 - 1436110 | 16151.6 |
| acetyl-coa carboxylase biotin carboxylase subunit | AO275_14790 | Not Available | Positive | 1436128 - 1437471 | 48745.6 |
| ribosomal protein l11 methyltransferase | AO275_14795 | Not Available | Positive | 1437597 - 1438475 | 31858.6 |
| hypothetical protein | AO275_14800 | Not Available | Positive | 1438500 - 1439846 | 50508.9 |
| pp_01245 | AO275_14805 | Not Available | Positive | 1440164 - 1441177 | Not Available |
| fis family transcriptional regulator | AO275_14810 | Not Available | Positive | 1441174 - 1441494 | 11722.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
