Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | AO275_14715 | Not Available | Negative | 1421541 - 1421834 | 10678.4 |
| penicillin-binding protein 1c | AO275_14720 | Not Available | Positive | 1422014 - 1424326 | 84842.3 |
| histidine kinase | AO275_14725 | Not Available | Negative | 1424522 - 1424929 | 15432.7 |
| pilus assembly protein | AO275_14730 | Not Available | Negative | 1425019 - 1425207 | 6764.4 |
| flp pilus assembly protein cpab | AO275_14735 | Not Available | Positive | 1425570 - 1426538 | 34038.9 |
| secretin | AO275_14740 | Not Available | Positive | 1426559 - 1427809 | 43635.4 |
| pilus assembly protein | AO275_14745 | Not Available | Positive | 1427806 - 1428996 | 43094.9 |
| atpase | AO275_14750 | Not Available | Positive | 1428996 - 1430252 | 46488.4 |
| type ii secretion system protein f | AO275_14755 | Not Available | Positive | 1430271 - 1431155 | 33190.3 |
| type ii secretion system protein f | AO275_14760 | Not Available | Positive | 1431157 - 1432041 | 32506.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
