Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-ketoacyl-acp reductase | AO275_14615 | Not Available | Positive | 1394562 - 1395917 | 48051.8 |
| acyl dehydratase | AO275_14620 | Not Available | Positive | 1395948 - 1396805 | 31726.3 |
| pyrophosphatase | AO275_14625 | Not Available | Positive | 1396942 - 1397247 | 11769.0 |
| sam-dependent methyltransferase | AO275_14630 | Not Available | Positive | 1397244 - 1397993 | 28321.1 |
| hypothetical protein | AO275_14635 | Not Available | Positive | 1398014 - 1398637 | 22786.7 |
| hypothetical protein | AO275_14640 | Not Available | Positive | 1398657 - 1399220 | 21170.0 |
| hypothetical protein | AO275_14645 | Not Available | Positive | 1399382 - 1401412 | 68682.1 |
| histidine kinase | AO275_14650 | Not Available | Negative | 1401409 - 1404177 | 103370.0 |
| pilus assembly protein tade | AO275_14655 | Not Available | Negative | 1404167 - 1404622 | 16303.9 |
| peptidase | AO275_14660 | Not Available | Positive | 1404698 - 1405198 | 17925.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
