Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper resistance protein copz | AO275_14565 | Not Available | Negative | 1384734 - 1384931 | 7062.51 |
| hypothetical protein | AO275_14570 | Not Available | Positive | 1385077 - 1385457 | 13716.8 |
| copper-transporting atpase | AO275_14575 | Not Available | Positive | 1385529 - 1387727 | 77673.4 |
| transcriptional regulator | AO275_14580 | Not Available | Positive | 1387724 - 1388125 | 14743.6 |
| kinase | AO275_14585 | Not Available | Negative | 1388276 - 1389172 | 33084.4 |
| arac family transcriptional regulator | AO275_14590 | Not Available | Negative | 1389382 - 1390185 | 29806.7 |
| bile acid:sodium symporter | AO275_14595 | Not Available | Positive | 1390271 - 1391299 | 36857.2 |
| hypothetical protein | AO275_14600 | Not Available | Negative | 1391307 - 1392758 | 53694.8 |
| hypothetical protein | AO275_14605 | Not Available | Negative | 1392793 - 1393071 | 10098.3 |
| acetyl-coa acetyltransferase | AO275_14610 | Not Available | Negative | 1393175 - 1394452 | 45609.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
