Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gcn5 family acetyltransferase | AO275_15715 | Not Available | Negative | 38987 - 39514 | 19657.6 |
| abc transporter substrate-binding protein | AO275_15720 | Not Available | Negative | 39522 - 40535 | 36642.8 |
| gnat family acetyltransferase | AO275_15725 | Not Available | Positive | 40689 - 41099 | 15295.8 |
| peptide deformylase | AO275_15730 | Not Available | Negative | 41109 - 41648 | 20101.3 |
| ribonuclease bn | AO275_15735 | Not Available | Negative | 41676 - 42665 | 36351.0 |
| hypothetical protein | AO275_15740 | Not Available | Negative | 42892 - 43083 | 6488.68 |
| hypothetical protein | AO275_15745 | Not Available | Positive | 43329 - 43709 | 14628.7 |
| hypothetical protein | AO275_15750 | Not Available | Negative | 43810 - 44211 | 14266.8 |
| disulfide bond formation protein dsba | AO275_15755 | Not Available | Positive | 44365 - 44997 | 23738.6 |
| gntr family transcriptional regulator | AO275_15760 | Not Available | Negative | 45041 - 45877 | 30975.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
