Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter | AO275_14515 | Not Available | Positive | 1373891 - 1374880 | 33863.6 |
| iron-dicitrate transporter subunit fecd | AO275_14520 | Not Available | Positive | 1374877 - 1375845 | 33496.4 |
| iron abc transporter | AO275_14525 | Not Available | Positive | 1375850 - 1376641 | 28421.5 |
| abc transporter substrate-binding protein | AO275_14530 | Not Available | Positive | 1376792 - 1377886 | 39426.3 |
| 2og-fe(ii) oxygenase | AO275_14535 | Not Available | Positive | 1377961 - 1378929 | 36237.9 |
| adenosine deaminase | AO275_14540 | Not Available | Positive | 1379012 - 1379965 | 36045.8 |
| arsr family transcriptional regulator | AO275_14545 | Not Available | Negative | 1380062 - 1380754 | 24555.8 |
| lysr family transcriptional regulator | AO275_14550 | Not Available | Negative | 1381211 - 1382116 | 33445.5 |
| nadph:quinone reductase | AO275_14555 | Not Available | Positive | 1382231 - 1383244 | 36612.0 |
| mfs transporter | AO275_14560 | Not Available | Negative | 1383302 - 1384498 | 41724.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
