Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine permease xanp | AO275_14465 | Not Available | Positive | 1361915 - 1363312 | 48799.9 |
| tetr family transcriptional regulator | AO275_14470 | Not Available | Positive | 1363397 - 1364059 | 24772.8 |
| thymidylate synthase | AO275_14475 | Not Available | Positive | 1364092 - 1364685 | 21439.4 |
| abc transporter | AO275_14480 | Not Available | Positive | 1365208 - 1366761 | 55547.3 |
| sugar abc transporter permease | AO275_14485 | Not Available | Positive | 1366773 - 1367873 | 39298.5 |
| abc transporter permease | AO275_14490 | Not Available | Positive | 1367873 - 1368799 | 32530.2 |
| short-chain dehydrogenase | AO275_14495 | Not Available | Positive | 1369004 - 1369687 | 24200.2 |
| 8-oxoguanine deaminase | AO275_14500 | Not Available | Positive | 1369914 - 1371269 | 49033.0 |
| calcium:proton antiporter | AO275_14505 | Not Available | Negative | 1371607 - 1372698 | 38794.5 |
| iron-dicitrate transporter substrate-binding subunit | AO275_14510 | Not Available | Positive | 1372970 - 1373890 | 32796.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
