Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine kinase/phosphatase | AO275_13935 | Not Available | Positive | 1350424 - 1350831 | 14881.5 |
| ribosomal-protein-alanine acetyltransferase | AO275_13940 | Not Available | Negative | 1350841 - 1351293 | 17142.6 |
| energy transducer tonb | AO275_13945 | Not Available | Negative | 1351286 - 1352083 | 29281.5 |
| hypothetical protein | AO275_13950 | Not Available | Positive | 1352228 - 1353505 | 49077.0 |
| chromosome partitioning protein | AO275_13955 | Not Available | Positive | 1353495 - 1354196 | 26639.6 |
| chromosome partitioning protein para | AO275_13960 | Not Available | Positive | 1354193 - 1357012 | 105669.0 |
| hypothetical protein | AO275_14445 | Not Available | Negative | 1357481 - 1357732 | 8990.88 |
| methylmalonate-semialdehyde dehydrogenase | AO275_14450 | Not Available | Negative | 1357762 - 1359255 | 53554.3 |
| omega amino acid--pyruvate aminotransferase | AO275_14455 | Not Available | Negative | 1359337 - 1360683 | 48683.5 |
| lysr family transcriptional regulator | AO275_14460 | Not Available | Positive | 1360796 - 1361716 | 33790.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
