Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family acetyltransferase | AO275_13885 | Not Available | Positive | 1339258 - 1339695 | 16664.8 |
| chemotaxis protein | AO275_13890 | Not Available | Negative | 1339740 - 1341380 | 57535.9 |
| hypothetical protein | AO275_13895 | Not Available | Positive | 1341773 - 1343695 | 72633.1 |
| phosphatidylcholine synthase | AO275_13900 | Not Available | Positive | 1343784 - 1344503 | 26711.4 |
| mfs transporter | AO275_13905 | Not Available | Negative | 1344560 - 1345768 | 41893.8 |
| thiol-disulfide oxidoreductase | AO275_13910 | Not Available | Negative | 1346045 - 1346488 | 17103.0 |
| alkylphosphonate utilization protein | AO275_13915 | Not Available | Negative | 1346574 - 1346915 | 12175.5 |
| phosphohydrolase | AO275_13920 | Not Available | Positive | 1347075 - 1347734 | 24357.8 |
| chemotaxis protein | AO275_13925 | Not Available | Positive | 1347868 - 1349541 | 59223.9 |
| carbonate dehydratase | AO275_13930 | Not Available | Negative | 1349599 - 1350237 | 24169.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
