Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AO275_13835 | Not Available | Negative | 1324832 - 1326169 | 49002.6 |
| sugar abc transporter permease | AO275_13840 | Not Available | Negative | 1326171 - 1326989 | 30545.4 |
| glycosyl transferase family 2 | AO275_13845 | Not Available | Positive | 1327483 - 1328448 | 36315.4 |
| 4-amino-4-deoxy-l-arabinose-phospho-udp flippase | AO275_13850 | Not Available | Negative | 1328651 - 1328989 | 12254.5 |
| glycosyl transferase family 2 | AO275_13855 | Not Available | Negative | 1328986 - 1329981 | 37035.1 |
| hypothetical protein | AO275_13860 | Not Available | Negative | 1330344 - 1332557 | 81588.7 |
| chemotaxis protein | AO275_13865 | Not Available | Negative | 1333160 - 1335217 | 73721.7 |
| Trna-met | Not Available | Not Available | Positive | 1335781 - 1335857 | Not Available |
| chemotaxis protein | AO275_13875 | Not Available | Positive | 1336143 - 1337789 | 58508.6 |
| diguanylate cyclase | AO275_13880 | Not Available | Positive | 1337967 - 1339163 | 44449.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
