Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | AO275_13785 | Not Available | Positive | 1310201 - 1311106 | 32929.3 |
| glucose-1-phosphate thymidylyltransferase | AO275_13790 | Not Available | Positive | 1311103 - 1311993 | 32874.2 |
| glycosyl transferase | AO275_13795 | Not Available | Positive | 1312007 - 1312954 | 35830.7 |
| mannose-1-phosphate guanyltransferase | AO275_13800 | Not Available | Positive | 1313540 - 1314982 | 53190.4 |
| adenylylsulfate kinase | AO275_13805 | Not Available | Positive | 1315286 - 1315882 | 21730.8 |
| hydroxyacylglutathione hydrolase | AO275_13810 | Not Available | Positive | 1315879 - 1317285 | 51292.7 |
| gdp-mannose 4,6-dehydratase | AO275_13815 | Not Available | Positive | 1317547 - 1318578 | 38820.4 |
| gdp-6-deoxy-d-lyxo-4-hexulose reductase | AO275_13820 | Not Available | Positive | 1318653 - 1319609 | 35127.0 |
| glycosyl transferase family 1 | AO275_13825 | Not Available | Negative | 1319737 - 1320867 | 43264.4 |
| glycosyl transferase family 2 | AO275_13830 | Not Available | Negative | 1320882 - 1324835 | 147808.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
