Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrochelatase | AO275_13635 | Not Available | Negative | 1283803 - 1284825 | 38392.5 |
| nad-dependent dehydratase | AO275_13640 | Not Available | Negative | 1284849 - 1285751 | 32922.2 |
| fad-dependent oxidoreductase | AO275_13645 | Not Available | Positive | 1286052 - 1287038 | 35910.6 |
| hypothetical protein | AO275_13650 | Not Available | Positive | 1287035 - 1287250 | 8407.24 |
| hypothetical protein | AO275_13655 | Not Available | Negative | 1287260 - 1287457 | 7477.13 |
| hypothetical protein | AO275_13660 | Not Available | Positive | 1287597 - 1288559 | 35844.2 |
| merr family transcriptional regulator | AO275_13665 | Not Available | Positive | 1288562 - 1289464 | 33915.0 |
| deoxyribodipyrimidine photolyase | AO275_13670 | Not Available | Positive | 1289474 - 1290922 | 54787.0 |
| transcriptional regulator | AO275_13675 | Not Available | Positive | 1290915 - 1291340 | 16475.5 |
| short-chain dehydrogenase | AO275_13680 | Not Available | Positive | 1291337 - 1292137 | 28878.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
