Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerate dehydrogenase | AO275_13535 | Not Available | Positive | 1267063 - 1268031 | 33983.2 |
| 16s rrna methyltransferase | AO275_13540 | Not Available | Positive | 1268209 - 1269207 | 35974.2 |
| hypothetical protein | AO275_13545 | Not Available | Positive | 1269454 - 1270038 | 20732.8 |
| peptidase m48 | AO275_13550 | Not Available | Negative | 1270098 - 1270916 | 29070.7 |
| hypothetical protein | AO275_13555 | Not Available | Negative | 1271071 - 1271700 | 23315.9 |
| hypothetical protein | AO275_13560 | Not Available | Negative | 1271733 - 1271996 | 9398.21 |
| hypothetical protein | AO275_13565 | Not Available | Negative | 1271996 - 1272178 | 6890.9 |
| glycerol acyltransferase | AO275_13570 | Not Available | Positive | 1272284 - 1273447 | 43697.2 |
| hypothetical protein | AO275_13575 | Not Available | Positive | 1273669 - 1273875 | 7887.19 |
| hypothetical protein | AO275_13580 | Not Available | Negative | 1273949 - 1274533 | 20582.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
