Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_13435 | Not Available | Negative | 1242528 - 1242743 | 7827.95 |
| phosphate acetyltransferase | AO275_13440 | Not Available | Positive | 1242824 - 1244914 | 75215.2 |
| acyltransferase | AO275_13445 | Not Available | Positive | 1244977 - 1245876 | 35032.8 |
| cell envelope biogenesis protein ompa | AO275_13450 | Not Available | Negative | 1246018 - 1246731 | 24935.2 |
| abc transporter permease | AO275_13455 | Not Available | Negative | 1246828 - 1247754 | 32448.9 |
| abc transporter permease | AO275_13460 | Not Available | Negative | 1247754 - 1248869 | 40457.9 |
| abc transporter atp-binding protein | AO275_13465 | Not Available | Negative | 1248862 - 1250376 | 54210.0 |
| hypothetical protein | AO275_13470 | Not Available | Negative | 1250373 - 1251464 | 39155.7 |
| pyrimidine utilization regulatory protein r | AO275_13475 | Not Available | Negative | 1251705 - 1252448 | 27870.7 |
| pyrimidine utilization protein a | AO275_13480 | Not Available | Positive | 1252733 - 1253815 | 39579.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
