Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine protein kinase | AO275_13335 | Not Available | Negative | 1227028 - 1227939 | 32299.2 |
| flavodoxin | AO275_13340 | Not Available | Negative | 1228052 - 1228504 | 15837.0 |
| histidine kinase | AO275_13345 | Not Available | Positive | 1228650 - 1229105 | 17126.4 |
| hypothetical protein | AO275_13350 | Not Available | Positive | 1229183 - 1229788 | 23241.0 |
| merr family transcriptional regulator | AO275_13355 | Not Available | Negative | 1229823 - 1230785 | 35883.4 |
| antibiotic biosynthesis monooxygenase | AO275_13360 | Not Available | Positive | 1231019 - 1231579 | 20921.4 |
| dihydrofolate reductase | AO275_13365 | Not Available | Positive | 1231842 - 1232552 | 25478.6 |
| gtp cyclohydrolase | AO275_13370 | Not Available | Positive | 1232574 - 1233137 | 20884.6 |
| d-erythro-7,8-dihydroneopterin triphosphate epimerase | AO275_13375 | Not Available | Positive | 1233137 - 1233508 | 14050.0 |
| cell division protein dedd | AO275_13380 | Not Available | Positive | 1233553 - 1233849 | 11350.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
