Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate-starvation-inducible protein psie | AO275_13285 | Not Available | Negative | 1213578 - 1214066 | 17790.0 |
| hypothetical protein | AO275_13290 | Not Available | Positive | 1214437 - 1214709 | 9817.45 |
| udp-n-acetylglucosamine 2-epimerase | AO275_13295 | Not Available | Positive | 1215389 - 1216627 | 45670.4 |
| hypothetical protein | AO275_13300 | Not Available | Positive | 1216770 - 1218986 | 78575.2 |
| type ii secretion system protein e | AO275_13305 | Not Available | Positive | 1218999 - 1221119 | 81256.8 |
| peptidase aspartic, active site protein | AO275_13310 | Not Available | Positive | 1221116 - 1223080 | 72628.3 |
| hypothetical protein | AO275_13315 | Not Available | Positive | 1223115 - 1223987 | 31727.4 |
| amino acid dehydrogenase | AO275_13320 | Not Available | Negative | 1224041 - 1225060 | 35887.1 |
| hypothetical protein | AO275_13325 | Not Available | Positive | 1225223 - 1226026 | 30183.6 |
| hypothetical protein | AO275_13330 | Not Available | Negative | 1226267 - 1226785 | 19201.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
