Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+-dependent transporter | AO275_13185 | Not Available | Negative | 1193909 - 1194109 | 7638.78 |
| fusaric acid resistance protein | AO275_13190 | Not Available | Negative | 1194099 - 1196285 | 81103.0 |
| rnd transporter | AO275_13195 | Not Available | Negative | 1196287 - 1197777 | 53528.7 |
| lysr family transcriptional regulator | AO275_13200 | Not Available | Positive | 1197976 - 1198923 | 34552.5 |
| bifunctional glyoxylate/hydroxypyruvate reductase b | AO275_13205 | Not Available | Positive | 1199012 - 1199986 | 35477.6 |
| hypothetical protein | AO275_13210 | Not Available | Negative | 1200158 - 1201060 | 32416.8 |
| arac family transcriptional regulator | AO275_13215 | Not Available | Positive | 1201197 - 1202075 | 32645.9 |
| hypothetical protein | AO275_13220 | Not Available | Negative | 1202072 - 1202401 | 12171.5 |
| peptidase | AO275_13225 | Not Available | Negative | 1202401 - 1203951 | 57012.6 |
| hypothetical protein | AO275_13230 | Not Available | Negative | 1203972 - 1204313 | 12029.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
