Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdenum cofactor biosynthesis protein moac | AO275_13080 | Not Available | Negative | 1168200 - 1168685 | 16950.9 |
| atpase | AO275_13085 | Not Available | Negative | 1168906 - 1170300 | 51866.2 |
| polysaccharide deacetylase | AO275_13090 | Not Available | Negative | 1170596 - 1171774 | 44807.7 |
| hypothetical protein | AO275_13095 | Not Available | Positive | 1171988 - 1172767 | 29489.3 |
| hypothetical protein | AO275_13100 | Not Available | Positive | 1173295 - 1173489 | 7261.05 |
| gdp-mannose dehydrogenase | AO275_13105 | Not Available | Positive | 1173583 - 1174899 | 47669.2 |
| glycosyl transferase | AO275_13110 | Not Available | Positive | 1174998 - 1176479 | 56052.0 |
| hemolysin d | AO275_13115 | Not Available | Positive | 1176520 - 1177692 | 41941.4 |
| alginate biosynthesis protein | AO275_13120 | Not Available | Positive | 1177695 - 1179107 | 51013.4 |
| transcriptional regulator | AO275_13125 | Not Available | Positive | 1179104 - 1180585 | 54961.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
