Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketosteroid isomerase | AO275_13030 | Not Available | Negative | 1158539 - 1159030 | 18576.9 |
| mfs transporter | AO275_13035 | Not Available | Negative | 1159115 - 1160347 | 43052.8 |
| glutamine abc transporter atp-binding protein | AO275_13040 | Not Available | Negative | 1160514 - 1161278 | 28871.5 |
| amino acid abc transporter permease | AO275_13045 | Not Available | Negative | 1161289 - 1162386 | 40495.9 |
| amino acid abc transporter permease | AO275_13050 | Not Available | Negative | 1162397 - 1163578 | 43392.3 |
| amino acid abc transporter substrate-binding protein | AO275_13055 | Not Available | Negative | 1163649 - 1164677 | 36485.5 |
| carboxylesterase | AO275_13060 | Not Available | Positive | 1165160 - 1165819 | 24234.9 |
| atp-dependent rna helicase rhlb | AO275_13065 | Not Available | Positive | 1165937 - 1167403 | 54368.3 |
| molybdenum cofactor biosynthesis protein moae | AO275_13070 | Not Available | Negative | 1167506 - 1167955 | 16614.7 |
| molybdenum cofactor biosynthesis protein moad | AO275_13075 | Not Available | Negative | 1167958 - 1168203 | 9173.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
