Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_26120 | Not Available | Negative | 1119230 - 1120768 | 56897.8 |
| penicillin-binding protein 1b | AO275_26125 | Not Available | Positive | 1120902 - 1123223 | 84965.9 |
| hypothetical protein | AO275_26130 | Not Available | Positive | 1123240 - 1123980 | 25248.4 |
| pseudouridine synthase | AO275_26135 | Not Available | Positive | 1123980 - 1124309 | 12751.4 |
| glycosyltransferase | AO275_26140 | Not Available | Negative | 1124321 - 1124752 | 15875.5 |
| acetolactate synthase 3 catalytic subunit | AO275_26145 | Not Available | Positive | 1125152 - 1126876 | 62602.0 |
| acetolactate synthase 3 regulatory subunit | AO275_26150 | Not Available | Positive | 1126879 - 1127370 | 17769.5 |
| ketol-acid reductoisomerase | AO275_26155 | Not Available | Positive | 1127417 - 1128433 | 36328.5 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | AO275_26160 | Not Available | Positive | 1128580 - 1129437 | 30507.1 |
| sulfoxide reductase catalytic subunit yedy | AO275_26165 | Not Available | Positive | 1129501 - 1130514 | 38010.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
