Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fis family transcriptional regulator | AO275_26070 | Not Available | Negative | 1108513 - 1109946 | 52388.7 |
| atpase | AO275_26075 | Not Available | Negative | 1109969 - 1112917 | 107940.0 |
| mfs transporter | AO275_26080 | Not Available | Negative | 1112907 - 1113083 | 6951.71 |
| glutamyl-q trna(asp) ligase | AO275_26085 | Not Available | Negative | 1113182 - 1114069 | 33248.6 |
| molecular chaperone dnak | AO275_26090 | Not Available | Negative | 1114225 - 1114665 | 17054.3 |
| aminotransferase | AO275_26095 | Not Available | Positive | 1115015 - 1116187 | 42799.9 |
| xre family transcriptional regulator | AO275_26100 | Not Available | Positive | 1116187 - 1116900 | 26441.7 |
| hypothetical protein | AO275_26105 | Not Available | Negative | 1116920 - 1117258 | 12606.8 |
| 2-deoxyribose-5-phosphate aldolase | AO275_26110 | Not Available | Positive | 1117679 - 1118506 | 29391.2 |
| hypothetical protein | AO275_26115 | Not Available | Negative | 1118789 - 1119133 | 12780.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
