Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa acetyltransferase | AO275_26020 | Not Available | Negative | 1097473 - 1098651 | 40373.9 |
| histidine kinase | AO275_26025 | Not Available | Negative | 1098779 - 1099645 | 31929.7 |
| acetyl-coa synthetase | AO275_26030 | Not Available | Negative | 1099698 - 1101635 | 71710.1 |
| glucose-6-phosphate isomerase | AO275_26035 | Not Available | Negative | 1101789 - 1103453 | 61492.2 |
| aspartate decarboxylase | AO275_26040 | Not Available | Negative | 1103639 - 1104019 | 14088.8 |
| pantoate--beta-alanine ligase | AO275_26045 | Not Available | Negative | 1104027 - 1104878 | 30880.1 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | AO275_26050 | Not Available | Negative | 1104875 - 1105675 | 28073.4 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | AO275_26055 | Not Available | Negative | 1105908 - 1106414 | 18461.3 |
| poly(a) polymerase | AO275_26060 | Not Available | Negative | 1106407 - 1107810 | 53562.1 |
| hypothetical protein | AO275_26065 | Not Available | Negative | 1108136 - 1108513 | 14070.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
