Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein | AO275_25920 | Not Available | Negative | 1076278 - 1076586 | 11426.2 |
| 23s rrna methyltransferase | AO275_25925 | Not Available | Positive | 1076691 - 1077341 | 24100.1 |
| atp-dependent metalloprotease | AO275_25930 | Not Available | Positive | 1077535 - 1079439 | 68993.2 |
| dihydropteroate synthase | AO275_25935 | Not Available | Positive | 1079448 - 1080299 | 30167.8 |
| phosphoglucosamine mutase | AO275_25940 | Not Available | Positive | 1080316 - 1081659 | 48134.2 |
| triosephosphate isomerase | AO275_25945 | Not Available | Positive | 1081726 - 1082481 | 26144.3 |
| preprotein translocase subunit secg | AO275_25950 | Not Available | Positive | 1082486 - 1082866 | 12880.7 |
| Trna-leu | Not Available | Not Available | Positive | 1082912 - 1082997 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1083094 - 1083170 | Not Available |
| ribosome maturation protein rimp | AO275_25965 | Not Available | Positive | 1083301 - 1083759 | 17117.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
