Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_25870 | Not Available | Negative | 1062965 - 1063486 | 19199.8 |
| fur family transcriptional regulator | AO275_25875 | Not Available | Positive | 1063585 - 1063992 | 15266.3 |
| dna repair protein recn | AO275_25880 | Not Available | Negative | 1064069 - 1065742 | 61630.1 |
| molecular chaperone grpe | AO275_25885 | Not Available | Positive | 1066012 - 1066575 | 20709.4 |
| molecular chaperone dnak | AO275_25890 | Not Available | Positive | 1066677 - 1068593 | 68647.6 |
| molecular chaperone dnaj | AO275_25895 | Not Available | Positive | 1068920 - 1070059 | 40558.7 |
| 4-hydroxy-tetrahydrodipicolinate reductase | AO275_25900 | Not Available | Positive | 1070080 - 1070883 | 28195.1 |
| carbamoyl phosphate synthase small subunit | AO275_25905 | Not Available | Positive | 1071157 - 1072293 | 40799.4 |
| carbamoyl phosphate synthase large subunit | AO275_25910 | Not Available | Positive | 1072430 - 1075651 | 117524.0 |
| transcription elongation factor grea | AO275_25915 | Not Available | Positive | 1075648 - 1076124 | 17392.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
