Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s ferredoxin | AO275_25820 | Not Available | Negative | 1051265 - 1054093 | 103198.0 |
| lactate utilization protein b/c | AO275_25825 | Not Available | Negative | 1054090 - 1054761 | 24951.8 |
| (fe-s)-binding protein | AO275_25830 | Not Available | Negative | 1054758 - 1056221 | 54143.4 |
| oxidoreductase | AO275_25835 | Not Available | Negative | 1056218 - 1057054 | 30814.5 |
| l-lactate permease | AO275_25840 | Not Available | Negative | 1057138 - 1058829 | 59239.6 |
| transcriptional regulator pdhr | AO275_25845 | Not Available | Positive | 1059228 - 1059995 | 28902.5 |
| ssra-binding protein | AO275_25850 | Not Available | Negative | 1060146 - 1060628 | 18391.3 |
| symporter | AO275_25855 | Not Available | Positive | 1060742 - 1062145 | 50646.0 |
| ribosome association toxin rata | AO275_25860 | Not Available | Positive | 1062153 - 1062587 | 16032.3 |
| protein rnfh | AO275_25865 | Not Available | Positive | 1062580 - 1062900 | 11459.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
