Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | PviCFBP13515_09510 | Not Available | Negative | 2141717 - 2141974 | 9646.17 |
| Repressor protein | PviCFBP13515_09515 | Not Available | Negative | 2142123 - 2142767 | 23926.9 |
| hypothetical protein | PviCFBP13515_09520 | Not Available | Positive | 2142910 - 2143347 | 15913.0 |
| Holin | PviCFBP13515_09525 | Not Available | Positive | 2143652 - 2144041 | 14124.8 |
| Lipoprotein | PviCFBP13515_09530 | Not Available | Positive | 2144022 - 2144360 | 12252.6 |
| Hypothetical protein | PviCFBP13515_09535 | Not Available | Positive | 2144447 - 2145037 | 21313.1 |
| Hypothetical protein | PviCFBP13515_09540 | Not Available | Positive | 2145034 - 2145219 | 6770.83 |
| Tail sheath protein | PviCFBP13515_09545 | Not Available | Positive | 2145238 - 2146734 | 53333.2 |
| Hypothetical protein | PviCFBP13515_09550 | Not Available | Positive | 2146802 - 2147149 | 12467.9 |
| Putative bacteriophage protein | PviCFBP13515_09555 | Not Available | Positive | 2147146 - 2147442 | 10598.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
