Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | PviCFBP13515_04855 | Not Available | Positive | 1024928 - 1026235 | 48057.2 |
| l-iditol 2-dehydrogenase | PviCFBP13515_04860 | Not Available | Positive | 1026270 - 1027043 | 27283.7 |
| deor/glpr transcriptional regulator | PviCFBP13515_04865 | Not Available | Positive | 1027149 - 1027970 | 29277.4 |
| 3-hydroxyisobutyrate dehydrogenase | PviCFBP13515_04870 | Not Available | Positive | 1028394 - 1029299 | 31040.5 |
| hypothetical protein | PviCFBP13515_04875 | Not Available | Positive | 1029310 - 1030599 | 44555.4 |
| aldolase | PviCFBP13515_04880 | Not Available | Positive | 1030599 - 1031237 | 23269.0 |
| transporter | PviCFBP13515_04885 | Not Available | Positive | 1031400 - 1032857 | 50390.0 |
| hydroxypyruvate isomerase | PviCFBP13515_04890 | Not Available | Positive | 1032880 - 1033662 | 29057.4 |
| acyl-coa thioesterase | PviCFBP13515_04895 | Not Available | Negative | 1033837 - 1034232 | 14869.9 |
| adenosylhomocysteinase | PviCFBP13515_04900 | Not Available | Positive | 1034644 - 1036053 | 51366.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
