Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13515_04805 | Not Available | Positive | 1015234 - 1016226 | 35445.3 |
| hypothetical protein | PviCFBP13515_04810 | Not Available | Positive | 1016223 - 1016966 | 27844.9 |
| hypothetical protein | PviCFBP13515_04815 | Not Available | Positive | 1016963 - 1018057 | 40143.1 |
| inositol phosphorylceramide synthase | PviCFBP13515_04820 | Not Available | Positive | 1018054 - 1018686 | 23535.1 |
| fatty acid desaturase | PviCFBP13515_04825 | Not Available | Positive | 1018673 - 1019638 | 35620.1 |
| outer membrane porin, oprd family | PviCFBP13515_04830 | Not Available | Negative | 1019651 - 1020976 | 48700.8 |
| hypothetical protein | PviCFBP13515_04835 | Not Available | Negative | 1021308 - 1021526 | 7988.25 |
| duf2790 domain-containing protein | PviCFBP13515_04840 | Not Available | Positive | 1021775 - 1022107 | 12293.0 |
| sodium:proton antiporter | PviCFBP13515_04845 | Not Available | Positive | 1022412 - 1023668 | 45159.0 |
| arac family transcriptional regulator | PviCFBP13515_04850 | Not Available | Negative | 1023694 - 1024617 | 34639.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
