Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pbsx family transcriptional regulator | PviCFBP13515_04755 | Not Available | Negative | 1002474 - 1002728 | 9219.3 |
| nad-dependent dna ligase ligb | PviCFBP13515_04760 | Not Available | Positive | 1002972 - 1004654 | 61701.6 |
| duf1090 domain-containing protein | PviCFBP13515_04765 | Not Available | Positive | 1004709 - 1005116 | 14960.8 |
| hypothetical protein | PviCFBP13515_04770 | Not Available | Negative | 1005314 - 1005715 | 14097.7 |
| two-component sensor histidine kinase | PviCFBP13515_04775 | Not Available | Negative | 1005812 - 1007203 | 51414.4 |
| dna-binding response regulator | PviCFBP13515_04780 | Not Available | Negative | 1007200 - 1007874 | 25810.5 |
| tolc family protein | PviCFBP13515_04785 | Not Available | Positive | 1008119 - 1009342 | 44424.7 |
| efflux rnd transporter periplasmic adaptor subunit | PviCFBP13515_04790 | Not Available | Positive | 1009400 - 1010677 | 45137.9 |
| cusa/czca family heavy metal efflux rnd transporter | PviCFBP13515_04795 | Not Available | Positive | 1010702 - 1013869 | 114007.0 |
| glycosyltransferase family 2 protein | PviCFBP13515_04800 | Not Available | Positive | 1014092 - 1015180 | 39363.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
