Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructose-bisphosphate aldolase class ii | PviCFBP13515_04705 | Not Available | Negative | 993119 - 994183 | 38632.3 |
| hypothetical protein | PviCFBP13515_04710 | Not Available | Negative | 994298 - 994624 | 11846.0 |
| hypothetical protein | PviCFBP13515_04715 | Not Available | Negative | 994679 - 994870 | 6438.53 |
| hypothetical protein | PviCFBP13515_04720 | Not Available | Negative | 994957 - 995190 | 8412.09 |
| phosphoglycerate kinase | PviCFBP13515_04725 | Not Available | Negative | 995219 - 996382 | 40337.6 |
| erythrose-4-phosphate dehydrogenase | PviCFBP13515_04730 | Not Available | Negative | 996399 - 997448 | 38599.9 |
| transketolase | PviCFBP13515_04735 | Not Available | Negative | 997582 - 999579 | 72373.6 |
| methyltransferase domain-containing protein | PviCFBP13515_04740 | Not Available | Positive | 999838 - 1000833 | 36189.5 |
| methionine adenosyltransferase | PviCFBP13515_04745 | Not Available | Positive | 1000854 - 1002044 | 42585.6 |
| toxin chpb | PviCFBP13515_04750 | Not Available | Negative | 1002130 - 1002477 | 12252.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
