Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | PviCFBP13515_04500 | Not Available | Negative | 957162 - 958310 | 42299.2 |
| nucleoside-diphosphate kinase | PviCFBP13515_04505 | Not Available | Negative | 958342 - 958767 | 14951.7 |
| fe-s assembly protein iscx | PviCFBP13515_04510 | Not Available | Negative | 958864 - 959064 | 7671.03 |
| isc system 2fe-2s type ferredoxin | PviCFBP13515_04515 | Not Available | Negative | 959079 - 959420 | 12329.5 |
| fe-s protein assembly chaperone hsca | PviCFBP13515_04520 | Not Available | Negative | 959424 - 961286 | 66360.6 |
| co-chaperone hscb | PviCFBP13515_04525 | Not Available | Negative | 961333 - 961854 | 20270.8 |
| iron-sulfur cluster assembly protein isca | PviCFBP13515_04530 | Not Available | Negative | 961865 - 962188 | 11547.6 |
| fe-s cluster assembly scaffold iscu | PviCFBP13515_04535 | Not Available | Negative | 962223 - 962609 | 13856.6 |
| iscs subfamily cysteine desulfurase | PviCFBP13515_04540 | Not Available | Negative | 962696 - 963910 | 44412.9 |
| fe-s cluster assembly transcriptional regulator iscr | PviCFBP13515_04545 | Not Available | Negative | 963955 - 964446 | 17865.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
