Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13515_04450 | Not Available | Negative | 946967 - 947398 | 14837.4 |
| amidohydrolase | PviCFBP13515_04455 | Not Available | Negative | 947456 - 948247 | 29598.1 |
| pyridoxal phosphate-dependent aminotransferase | PviCFBP13515_04460 | Not Available | Negative | 948235 - 949383 | 42636.0 |
| ribosome biogenesis gtpase der | PviCFBP13515_04465 | Not Available | Negative | 949504 - 950973 | 54896.9 |
| outer membrane protein assembly factor bamb | PviCFBP13515_04470 | Not Available | Negative | 951114 - 952265 | 40835.7 |
| gtp-binding protein | PviCFBP13515_04475 | Not Available | Negative | 952258 - 952899 | 22830.9 |
| histidine--trna ligase | PviCFBP13515_04480 | Not Available | Negative | 952939 - 954228 | 47948.6 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | PviCFBP13515_04485 | Not Available | Negative | 954251 - 955360 | 39766.2 |
| duf4115 domain-containing protein | PviCFBP13515_04490 | Not Available | Negative | 955364 - 956365 | 35255.7 |
| type iv pilus biogenesis/stability protein pilw | PviCFBP13515_04495 | Not Available | Negative | 956365 - 957123 | 28615.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
