Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine aminopeptidase | PviCFBP13515_04395 | Not Available | Positive | 935221 - 936084 | 31443.2 |
| hypothetical protein | PviCFBP13515_04400 | Not Available | Positive | 936091 - 936300 | 7448.46 |
| glutamine-hydrolyzing gmp synthase | PviCFBP13515_04405 | Not Available | Negative | 936518 - 938095 | 58154.8 |
| imp dehydrogenase | PviCFBP13515_04410 | Not Available | Negative | 938201 - 939670 | 51936.9 |
| sugar abc transporter atpase | PviCFBP13515_04415 | Not Available | Negative | 939766 - 940314 | 20438.4 |
| sulfite exporter taue/safe family protein | PviCFBP13515_04420 | Not Available | Negative | 940391 - 941134 | 26364.6 |
| exodeoxyribonuclease vii large subunit | PviCFBP13515_04425 | Not Available | Positive | 941351 - 942742 | 51736.9 |
| peptidase m23 | PviCFBP13515_04430 | Not Available | Positive | 942750 - 943574 | 29431.7 |
| 2-isopropylmalate synthase | PviCFBP13515_04440 | Not Available | Positive | 943967 - 945637 | 61483.6 |
| oxaloacetate decarboxylase | PviCFBP13515_04445 | Not Available | Positive | 946005 - 946874 | 31443.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
