Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma carbonic anhydrase family protein | PviCFBP13515_04340 | Not Available | Negative | 920247 - 920771 | 18621.5 |
| coa pyrophosphatase | PviCFBP13515_04345 | Not Available | Negative | 920830 - 921426 | 22250.5 |
| nudix hydrolase | PviCFBP13515_04350 | Not Available | Positive | 921576 - 922127 | 20851.1 |
| hypothetical protein | PviCFBP13515_04355 | Not Available | Positive | 922178 - 922741 | 21430.9 |
| ngg1p interacting factor nif3 | PviCFBP13515_04360 | Not Available | Negative | 922948 - 923259 | 11522.6 |
| phosphoribosylformylglycinamidine synthase | PviCFBP13515_04365 | Not Available | Negative | 923276 - 927172 | 140755.0 |
| membrane-bound lytic murein transglycosylase mltf | PviCFBP13515_04370 | Not Available | Positive | 927386 - 928876 | 55923.2 |
| trna adenosine(34) deaminase tada | PviCFBP13515_04375 | Not Available | Negative | 928873 - 929376 | 18028.8 |
| copper oxidase | PviCFBP13515_04380 | Not Available | Negative | 929376 - 930749 | 50700.6 |
| autotransporter outer membrane beta-barrel domain-containing protein | PviCFBP13515_04390 | Not Available | Positive | 932541 - 934841 | 80591.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
