Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein chew | PviCFBP13515_04190 | Not Available | Negative | 885944 - 886633 | 25176.9 |
| chemotaxis protein cher | PviCFBP13515_04195 | Not Available | Negative | 886633 - 887907 | 46193.2 |
| chemotaxis protein chew | PviCFBP13515_04200 | Not Available | Negative | 887904 - 888440 | 20103.3 |
| methyl-accepting chemotaxis protein | PviCFBP13515_04205 | Not Available | Negative | 888450 - 890072 | 58961.7 |
| duf533 domain-containing protein | PviCFBP13515_04210 | Not Available | Negative | 890424 - 891176 | 26206.2 |
| hybrid sensor histidine kinase/response regulator | PviCFBP13515_04215 | Not Available | Positive | 891470 - 893566 | 76826.1 |
| nadh:flavin oxidoreductase/nadh oxidase | PviCFBP13515_04220 | Not Available | Negative | 893699 - 894805 | 40494.1 |
| single-stranded-dna-specific exonuclease recj | PviCFBP13515_04225 | Not Available | Negative | 894917 - 896632 | 62715.0 |
| hypothetical protein | PviCFBP13515_04230 | Not Available | Negative | 896684 - 897226 | 20732.7 |
| tigr02285 family protein | PviCFBP13515_04235 | Not Available | Positive | 897445 - 898323 | 32654.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
