Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantothenate kinase | PviCFBP13515_04140 | Not Available | Negative | 873779 - 874528 | 26667.4 |
| bifunctional biotin--[acetyl-coa-carboxylase] synthetase/biotin operon repressor | PviCFBP13515_04145 | Not Available | Negative | 874518 - 875477 | 34698.1 |
| flavohemoglobin expression-modulating qegla motif protein | PviCFBP13515_04150 | Not Available | Negative | 875877 - 877154 | 47832.4 |
| hypothetical protein | PviCFBP13515_04155 | Not Available | Negative | 877188 - 877733 | 20050.7 |
| tetr family transcriptional regulator | PviCFBP13515_04160 | Not Available | Negative | 877759 - 878484 | 27252.1 |
| lysine--trna ligase | PviCFBP13515_04165 | Not Available | Negative | 878562 - 880064 | 56980.0 |
| peptide chain release factor 2 | PviCFBP13515_04170 | Not Available | Negative | 880188 - 881283 | 41134.1 |
| diguanylate cyclase response regulator | PviCFBP13515_04175 | Not Available | Negative | 881530 - 882534 | 37053.4 |
| chemotaxis response regulator protein-glutamate methylesterase | PviCFBP13515_04180 | Not Available | Negative | 882580 - 883590 | 35921.9 |
| hybrid sensor histidine kinase/response regulator | PviCFBP13515_04185 | Not Available | Negative | 883587 - 885947 | 86025.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
