Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l10 | PviCFBP13515_04090 | Not Available | Negative | 869777 - 870277 | 17590.2 |
| 50s ribosomal protein l1 | PviCFBP13515_04095 | Not Available | Negative | 870473 - 871168 | 24076.3 |
| 50s ribosomal protein l11 | PviCFBP13515_04100 | Not Available | Negative | 871168 - 871599 | 14869.0 |
| transcription termination/antitermination protein nusg | PviCFBP13515_04105 | Not Available | Negative | 871718 - 872251 | 19995.0 |
| preprotein translocase subunit sece | PviCFBP13515_04110 | Not Available | Negative | 872261 - 872629 | 13313.8 |
| Trna-trp | Not Available | Not Available | Positive | 872676 - 872751 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 872916 - 872991 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 873018 - 873091 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 873116 - 873200 | Not Available |
| hypothetical protein | PviCFBP13515_04135 | Not Available | Negative | 873343 - 873771 | 16169.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
