Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l4 | PviCFBP13515_04040 | Not Available | Negative | 854474 - 855076 | 21845.3 |
| 50s ribosomal protein l3 | PviCFBP13515_04045 | Not Available | Negative | 855089 - 855724 | 22593.1 |
| 30s ribosomal protein s10 | PviCFBP13515_04050 | Not Available | Negative | 855806 - 856117 | 11753.3 |
| elongation factor tu | PviCFBP13515_04055 | Not Available | Negative | 856259 - 857452 | 43426.2 |
| elongation factor g | PviCFBP13515_04060 | Not Available | Negative | 857484 - 859589 | 77276.5 |
| 30s ribosomal protein s7 | PviCFBP13515_04065 | Not Available | Negative | 859620 - 860090 | 17648.6 |
| 30s ribosomal protein s12 | PviCFBP13515_04070 | Not Available | Negative | 860213 - 860584 | 13725.7 |
| dna-directed rna polymerase subunit beta' | PviCFBP13515_04075 | Not Available | Negative | 860779 - 864978 | 154799.0 |
| dna-directed rna polymerase subunit beta | PviCFBP13515_04080 | Not Available | Negative | 865043 - 869116 | 151126.0 |
| 50s ribosomal protein l7/l12 | PviCFBP13515_04085 | Not Available | Negative | 869337 - 869702 | 12499.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
