Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l36 | PviCFBP13515_03940 | Not Available | Negative | 845404 - 845520 | 4434.66 |
| preprotein translocase subunit secy | PviCFBP13515_03945 | Not Available | Negative | 845549 - 846883 | 47901.6 |
| 50s ribosomal protein l15 | PviCFBP13515_03950 | Not Available | Negative | 846884 - 847318 | 15195.4 |
| 50s ribosomal protein l30 | PviCFBP13515_03955 | Not Available | Negative | 847322 - 847498 | 6525.29 |
| 30s ribosomal protein s5 | PviCFBP13515_03960 | Not Available | Negative | 847501 - 848001 | 17694.6 |
| 50s ribosomal protein l18 | PviCFBP13515_03965 | Not Available | Negative | 848005 - 848355 | 12604.3 |
| 50s ribosomal protein l6 | PviCFBP13515_03970 | Not Available | Negative | 848366 - 848899 | 19266.3 |
| 30s ribosomal protein s8 | PviCFBP13515_03975 | Not Available | Negative | 848912 - 849304 | 14060.2 |
| 30s ribosomal protein s14 | PviCFBP13515_03980 | Not Available | Negative | 849518 - 849823 | 11474.2 |
| 50s ribosomal protein l5 | PviCFBP13515_03985 | Not Available | Negative | 849837 - 850376 | 20458.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
