Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nagc family transcriptional regulator | PviCFBP13515_03840 | Not Available | Negative | 824390 - 825520 | 41478.6 |
| glycerol-3-phosphate abc transporter substrate-binding protein | PviCFBP13515_03845 | Not Available | Positive | 825688 - 826998 | 48161.8 |
| sugar abc transporter permease | PviCFBP13515_03850 | Not Available | Positive | 826995 - 827888 | 32422.6 |
| abc transporter permease | PviCFBP13515_03855 | Not Available | Positive | 827885 - 828778 | 32508.8 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | PviCFBP13515_03860 | Not Available | Positive | 828775 - 829896 | 40738.0 |
| glycerophosphoryl diester phosphodiesterase | PviCFBP13515_03865 | Not Available | Positive | 829905 - 830666 | 28086.9 |
| inositol monophosphatase | PviCFBP13515_03870 | Not Available | Positive | 830663 - 831418 | 26984.3 |
| alkene reductase | PviCFBP13515_03875 | Not Available | Negative | 831440 - 832438 | 35608.9 |
| hypothetical protein | PviCFBP13515_03880 | Not Available | Negative | 832703 - 833608 | 33096.3 |
| hypothetical protein | PviCFBP13515_03885 | Not Available | Negative | 833593 - 834723 | 42530.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
