Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator nrdr | PviCFBP13515_03740 | Not Available | Negative | 804408 - 804872 | 17787.4 |
| hypothetical protein | PviCFBP13515_03745 | Not Available | Positive | 805053 - 805502 | 15982.6 |
| methyltransferase | PviCFBP13515_03750 | Not Available | Positive | 805499 - 806155 | 24128.8 |
| thioredoxin | PviCFBP13515_03755 | Not Available | Positive | 806238 - 807110 | 32186.6 |
| hypothetical protein | PviCFBP13515_03760 | Not Available | Negative | 807168 - 807521 | 12444.9 |
| nuclear transport factor 2 family protein | PviCFBP13515_03765 | Not Available | Negative | 807583 - 808005 | 16341.8 |
| duf2796 domain-containing protein | PviCFBP13515_03770 | Not Available | Positive | 808270 - 808857 | 21202.9 |
| abc transporter atp-binding protein | PviCFBP13515_03775 | Not Available | Positive | 808927 - 809637 | 25888.1 |
| peptide abc transporter permease | PviCFBP13515_03780 | Not Available | Positive | 809639 - 810904 | 46283.6 |
| duf3299 domain-containing protein | PviCFBP13515_03785 | Not Available | Positive | 810913 - 811437 | 19135.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
