Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13515_03640 | Not Available | Negative | 784090 - 784269 | 6540.97 |
| glutathione s-transferase | PviCFBP13515_03645 | Not Available | Positive | 784331 - 784999 | 25120.0 |
| dienelactone hydrolase | PviCFBP13515_03650 | Not Available | Positive | 785058 - 786239 | 42316.7 |
| alpha/beta hydrolase | PviCFBP13515_03655 | Not Available | Negative | 786260 - 787123 | 31522.7 |
| autotransporter outer membrane beta-barrel domain-containing protein | PviCFBP13515_03660 | Not Available | Negative | 787123 - 789363 | 77788.3 |
| glutathione-dependent disulfide-bond oxidoreductase | PviCFBP13515_03665 | Not Available | Positive | 789757 - 790599 | 31297.9 |
| hypothetical protein | PviCFBP13515_03670 | Not Available | Positive | 790941 - 791369 | 15979.7 |
| dna helicase ii | PviCFBP13515_03675 | Not Available | Negative | 791396 - 793285 | 70945.7 |
| cystathionine beta-lyase | PviCFBP13515_03680 | Not Available | Positive | 793495 - 794661 | 42246.7 |
| exodeoxyribonuclease vii small subunit | PviCFBP13515_03685 | Not Available | Positive | 794788 - 795033 | 9036.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
