Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubix family flavin prenyltransferase | PviCFBP13515_03590 | Not Available | Negative | 773566 - 774195 | 22633.5 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | PviCFBP13515_03595 | Not Available | Negative | 774192 - 775541 | 48274.7 |
| aldehyde dehydrogenase | PviCFBP13515_03600 | Not Available | Positive | 775768 - 777288 | 54880.7 |
| ethanolamine ammonia lyase large subunit | PviCFBP13515_03605 | Not Available | Positive | 777735 - 779129 | 50326.0 |
| ethanolamine ammonia-lyase | PviCFBP13515_03610 | Not Available | Positive | 779126 - 780004 | 31742.8 |
| gnat family n-acetyltransferase | PviCFBP13515_03615 | Not Available | Positive | 780090 - 780551 | 18005.7 |
| deda family protein | PviCFBP13515_03620 | Not Available | Positive | 780742 - 781389 | 23687.8 |
| zinc-dependent peptidase | PviCFBP13515_03625 | Not Available | Positive | 781393 - 782205 | 30765.8 |
| inorganic diphosphatase | PviCFBP13515_03630 | Not Available | Positive | 782315 - 782842 | 19359.1 |
| xre family transcriptional regulator | PviCFBP13515_03635 | Not Available | Positive | 783181 - 783918 | 27769.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
