Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase | PviCFBP13515_03540 | Not Available | Positive | 766061 - 766732 | 25055.0 |
| phosphatase pap2 family protein | PviCFBP13515_03545 | Not Available | Positive | 766736 - 768052 | 47098.0 |
| atp-dependent protease | PviCFBP13515_03550 | Not Available | Negative | 768253 - 768843 | 21493.7 |
| lrgb family protein | PviCFBP13515_03555 | Not Available | Negative | 768855 - 769571 | 24819.4 |
| cida/lrga family protein | PviCFBP13515_03560 | Not Available | Negative | 769568 - 769930 | 13265.0 |
| dehydratase | PviCFBP13515_03565 | Not Available | Positive | 770135 - 770590 | 16820.7 |
| peptidase c13 | PviCFBP13515_03570 | Not Available | Positive | 770729 - 772456 | 62077.1 |
| nucleoside-diphosphate sugar epimerase | PviCFBP13515_03575 | Not Available | Positive | 772484 - 773125 | 23298.3 |
| hypothetical protein | PviCFBP13515_03580 | Not Available | Positive | 773122 - 773247 | 4814.04 |
| ycek/yidq family lipoprotein | PviCFBP13515_03585 | Not Available | Negative | 773289 - 773573 | 9500.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
