Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | PviCFBP13515_03435 | Not Available | Negative | 745598 - 746272 | 24251.6 |
| methionine abc transporter atp-binding protein | PviCFBP13515_03440 | Not Available | Negative | 746272 - 747279 | 36813.4 |
| catalase hpii | PviCFBP13515_03445 | Not Available | Positive | 747589 - 749736 | 78613.6 |
| hypothetical protein | PviCFBP13515_03450 | Not Available | Negative | 749983 - 750699 | 25866.3 |
| zinc abc transporter permease subunit znub | PviCFBP13515_03455 | Not Available | Negative | 750738 - 751526 | 27381.0 |
| zinc abc transporter atp-binding protein znuc | PviCFBP13515_03460 | Not Available | Negative | 751519 - 752316 | 28826.9 |
| transcriptional repressor | PviCFBP13515_03465 | Not Available | Negative | 752316 - 752798 | 17292.7 |
| zinc abc transporter substrate-binding protein znua | PviCFBP13515_03470 | Not Available | Positive | 752866 - 753810 | 34039.6 |
| lipoyl synthase | PviCFBP13515_03475 | Not Available | Negative | 754376 - 755383 | 37642.8 |
| lipoyl(octanoyl) transferase lipb | PviCFBP13515_03480 | Not Available | Negative | 755376 - 756032 | 23794.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
